YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119184192, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPAANPNTV AVGPLEFLFL DRRLLSDPGF SQQESRSFGH KGQTLPSSPS PPSFKKRSIF  60
   61 RRLLGFSAIA VLSFVIGTTA NSKLFSMHST VTQILSDEAK PDPYKAEDEF AREVDEHINS 120
  121 HPLTQSMREN PLFKESRPHL QIPVEMRSHS LTGGTLTGPN KIVVPPYVWN EEGGKSMVSM 180
  181 FYLGADVSGH PGIVHGGLLA TMLDEGLARC CFPSLPNKIG VTANLNIDYR RPAAAGSYFV 240
  241 LRAKTTKVEG RKAWVEGWIE TLPDDGSDPT ILVEAKALFV EPKNAAILPR LYRAE

Type	Start	End	Confidence
Cytoplasmic	1	62	0.95
Transmembrane Helix	63	80	0.95
Non-Cytoplasmic	81	295	0.97