YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90300644, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRSTSSL LRAARPLFRP AAFSRTYATV ESKSPETSNP ASSPEAKNKT FHIYRWDPDR  60
   61 PSEKPRMQTY TIDLNKTGPM MLDALIRIKN EVDPTLTFRR SCREGICGSC AMNIDGVNTL 120
  121 ACLCRIPTDA AKESRIYPLP HTYVVKDLVP DMTHFYKQYK SIKPYLQRET KSPDGKEIRQ 180
  181 SPADRKKLDG LYECILCACC STSCPSYWWN SEEYLGPAIL LQSYRWLVDS RDEKTAERRA 240
  241 ALDNSMSVYR CHTIMNCTRT CPKGLNPGKA IAEIKKQLAF A

Type	Start	End	Confidence
Signal Peptide	1	24	0.50
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	281	0.99