YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119190031, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQLPYAAD AESPLKPAEL QVLRAQYEKE GEYVGVQTKF NYAWGLIKSN SRPEQQEGVR  60
   61 LLSEIFRTAP ERRRECLYYL ALGNYKLGNY GEARRYNDLL LDHEPQNLQA ASLRSLIDDK 120
  121 VAKEGLVGVA ILGGVALAAG LVGGLIMKGA KRR

Type	Start	End	Confidence
Non-Cytoplasmic	1	124	0.60
Transmembrane Helix	125	147	0.90
Cytoplasmic	148	153	0.53