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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119189969, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTMEFRALS GGTGSSLARA TVIVAGVASL IASLLSIVKN YRKPLLQRYV VRILLMVPIY  60
   61 SVSSWTSIIS LQASSWTAPI RDIYEAFTIY TFFQLLINFL GGERALIIMT HGRPPVQHTW 120
  121 PLNQCLSKVD ISDPLTFLAI KRGILQYVWL KPILTVIAII LKATGTYQEG YLGLSSGYLW 180
  181 TGIVYNISVT VSLYSLALFW VCMHDDLRPF RPVPKFLCVK LVIFASYWQG FFLSILQWLG 240
  241 ALSNGPLGYT PDNLAAAIQD SLICFEMPIF AVFHWYAFSW HDYADPTISA ARMPIIYALR 300
  301 DAFGIKDLIQ DSKETFRGEN YEYRKFDSGD NVIAHEESHS RVARVMDGMR YERGGKAKYW 360
  361 IPKPGQANSR TPLLQSPSSR RESLPWSRRD SRGDVRQSYT DCDEITLDDE DERLFTNARA 420
  421 LEFGDWHYPV ITANEVPRDQ LLPSRSRSFT AIKYQHPPEG NQVKRSSRHR CRRIQGEGSQ 480
  481 EPSADSIAKK PRRTRRSRQN VESGSSSNSK PTNDQLVDIV DDVESADKER GRARAAGKES 540
  541 HHLAESRLIS RSSSGTLVQK DGPNETEAGP STSLPGEDDD SQDERQRLLG HIEDGIFNEE 600
  601 RAAWG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle