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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90304326, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDARAGAMS SGAWRRSIGG CRNRTCEMLG VGQILIELHR FNNNNDDEFG ALLLNPIDLL  60
   61 HSVLRVRTPF PKRPSTQHWS NPPARFCLLF ERRRNSGSPT VLYPCEDVRR DAPQPWLEAG 120
  121 GASSSSNSTT TPPSLLTSEA AQLPPTKIGR AVEISPIERG AFIYSGRGEG TPDLGHSTAS 180
  181 GAIKQRRELN SMGSRFNAVP EWSEHYIAYS NLKKLIYSLE KQVNNPELQE DAEFERAPLL 240
  241 DSALDTDSIF KRTLDGELAK VCSFYHAKET DLYKEVEDVV DEAESYTTDS VGFNMDSVAD 300
  301 SMVKSRTFSF GNYNRRASTF RGAGHSNDRR ASTAGESVAG GEGNPHEDDA YSEEDVDISE 360
  361 LPSHDIRRRS MSLREPDGRE PSDGHAISEM SDSRFFGMSS DLGHEHDPHL LALYNAGVSL 420
  421 KKHIISIYVS LCGLKSFIQL NRTGFSKALK KYDKILDRSL RRGYMNTTVS TAYPFTNQTI 480
  481 QHLDDKIARI ERLYADTVTK GDLSLSKREL RLHLREHVVW ERNTVWREMI GIERKAQAAN 540
  541 MGIRNTLLGG AQDAEAARRQ GDEQEPPTKE IVTPVGRCPV PSWMLTSNFA TLIAILIIFS 600
  601 VMLAVPIIDE PEQQNCLAML AFVIPLFVTS ILIPFLTVIL QVMRSDEDRS RLHPKDAAKY 660
  661 AFASMWTSVI MLLLGGFTIA AALSKHDIAR RMATFVLSKA GTRPRTVLVT NMFVSMFLSM 720
  721 WISNVAAPVL CYSIIQPMLR NLPPDSRFSK ALVLGIALAS NVGGAASPIA SPQNIIALQN 780
  781 MYPPISWGTW FFISIPVCVI CILLIWVLLV ATFHPGRGTT IVPIRQVKDK FSGVQWFITI 840
  841 VTLITIVLWC VSHEMESTFG DMGVIAIIPL VLFFGTGVLN KEDFNNFLWT IIILASGGLC 900
  901 LGKAVTSSGL LHTIARGITH RVENLSLYGV MFTLSSLILI IATFISHTVA ALILLPLVHE 960
  961 VGSAMEHPHP SLLVMGAALM CSVAMGLPTS GFPNMTAIMM EVPETGQRYL RVKHFISRGV1020
 1021 PASVISFAVV VTVGYAQQIS TTDRCTFSAV AIVGLVPLAE REQITLFCVW TMRAECWIRL1080
 1081 ILFVRWNIIR NGEGIDKSHT DHTSRRMNIC HNTRPVEDTC CFNAPGGLIL LTQFWDAQPA1140
 1141 TGPEDSWTLH GLWPDNCDGS FEQYCDKNRE YKNVTDILQS HGKEHLLEYM STYWKDWKGN1200
 1201 DENLWEHEWN KHGTCISTLE TRCYSGYKPQ AEVVDYFEKA AEMFEGLDTY KVLAAAGIEP1260
 1261 HPTKTYTLRE LQDAISKSHG MEVTLNCRDS RLNEVWYFFN VKGSLQSGKY VPTKPGGASS1320
 1321 TCPESGIKYF PKGGSSPTSS TRSGEPTSTG SSPSPTGTGG AFQGKGHLEV TSGNKRTGCL1380
 1381 ISYGTWYSTG TCATFTATPS GDGFTLRSSK GDCGIRNSVF ECDTDVEPSV FTADDEKLAF1440
 1441 GGSSTFSADE IPRGTTQVPI YTGGRSIELT IGWKRI

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