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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90304253, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METFVHEDSP LADYLEGSGE ARSDWDPQDI TSPSQEPLDT SPRNFAPTGG TKLQDRIRSK  60
   61 LPAPLRLKHS NKREALARVQ EACVAALSAG IGKSDNERFL EQFGYIVVAS QLLNEPTPPS 120
  121 YSSITGAVTQ SAKSTEGQPT SQPVVFDLYG AVFSALASFS VVWLFHATRP RHGTGWNIKR 180
  181 IFVFVFFFAA VAVSFYIFAR RQWLKYIRHE ALNVATVLVG NSQNFDSVVA ASVLLIQEVE 240
  241 LVSRGYRLST PMPPVTRLED QTQARRCLKL RRVLSKYMSE LLGQYLVAKK KLRLYADDTN 300
  301 LGKYYDIYDF SPEELDEAEL SLTDSSPEDK ASLRSLRILF TRLYAVRKSM LCCLLALPAD 360
  361 GTRLDAKRWS VAIEEMQHLS ASSGVYIQRL TDILHEQDCD VMETSPRLKL TPATRERHRA 420
  421 QFRRLNSLSQ GIRSLHAKMH LIREESNACL EKSGEDSELN TTLISQYESI GADLRGLLQE 480
  481 WEAGKSTLLA NIERPERLSR PSSLLKSPAS PTFSLGGATA VDGSPAAALR ALNGEDLSLP 540
  541 SPDHNMDDEE VFEAVALPRK RSSMTREARI ARVKEDRAKQ AAARDRADAN TRMLRELETV 600
  601 IKLRPRGRGG TRVTSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle