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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLPL_COCIM
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTANSSRRRL QMKSPRTDGD EKEEDYGLPD FHTRFINDED LEEFEKALNA PQALSLIAIN  60
   61 DWRPIHRRVR KPGKLPKVPQ RTKDETREGV VYTLLKWPFL LFVLSWIVFL GALYILTRLY 120
  121 ISLYEHFFAW TGQRQRLRRA LHSTVDYQHW KNAAKELDEY LGNDAWKERP QYAYYDNTTV 180
  181 MTVVSQLRQL RAQTEAGGIN GKAAAEELCT LLEGCIKTNF AGIENPRLYS ETYYGTKDLV 240
  241 QEFIEEAHTS LRLVLTSQQL SDERKQGLFR HLDTNFGRTV LCLSGGATLA YYHFGVIKAL 300
  301 LDNDVLPDII SGTSGGALVA ALVATRTDEE LKKLLVPELA HKIKACQDGI TTWAVRCWRT 360
  361 GARFDVMQWA EQCSWFCRGS TTFREAYERT GRVLNVSCVP SDPHSPTILA NYLTSPNCVI 420
  421 WSAVLASAAV PGILNPVVLM MKKPDGTLAP YSFGHKWKDG SLRTDIPLKA LDVHFNASFS 480
  481 IVSQVNPHIS LFFFSSRGSV GRPVTHRKGR GWRGGFLGSA LEQYIKLDLN KWLKVMRHLE 540
  541 LLPRPLGQDW SEIWLQRFSG TVTIWPKSVL SDLYYILSDP SVQRLARMLH EGQQCTFPKI 600
  601 KFISNRMKIE RVIAEGLMKD PEWAGSGRWN NVPFRSRTDQ TLPLEENAQQ RSASMLADTM 660
  661 SHLRDTGHFR EAPTSHPTGS PVRPTSGRRN SLMEEIRRQS AVFFDDTDDT MPSDDEKFPY 720
  721 QGQSSGTKIG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle