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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90304110, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLWGSKSD NSPNREEGPE DGQRSERPRD HRDEEREPDE QTRLLPQRGA YLSPDDPAVS  60
   61 PYNLWGVRAL RSLTVLFLII TLLWWVLLLV SIFVSPPMMN SRGSGFFDFS YTTLTLSNLL 120
  121 IALIFFSIPS LPMTIWGGLM SLFLAVNLFI ILGVPRLRVE EGWVGIASVA WATLISLYLV 180
  181 AQTRSVAWGK REEEERLTGR EETRRPLREW VAVLIQTIIM TITVLIAILL MSTLILRARD 240
  241 ASLAAPGKKY YVDNDKYQVH LACVGDTPSG ELTKNRTTPT VLLEAGEEPV EYSFLTWVDA 300
  301 AYQHGSIPRY CYWDRPGIAW SENAPSPHSA GMSADALSEA LALADEDGPW VLVSSGIGGI 360
  361 YSRIFASRHT HNIDGIMLVD VMHEDFLPDL GKPGRGFMLW LRGILSPLGL DRLAGAIFKG 420
  421 RNREDRVYGK RAYQAGKSIK AKLQESLVAD SITKSEISSA RNIQTPSTPL VVVSSGKEMK 480
  481 RSEKWADKQE DLTKITQNLL AWDIVKDAPH GVWETVEGKQ TLEKRLKQLI EGKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle