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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119188881, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSSLLPRR FREVTSADSA DAGWMNRHVT KLLQVVSRRA CFHPIHTIVV IALLASTTYV  60
   61 GLLDGTLFDS VKQANYSPGY LDVDTLLAGG RNLRLGQQTG WRWQVDDTFK LGDSDAARHL 120
  121 ALTTFVFPDS SARSPQIAPL AENVPLPPNS SARSVPHTPS LLAPISQDSS LAFAVPYDEI 180
  181 SPFLQAVREI PDSSGLKDGT EQKRWIMKAA RSPVSGSRAA LRIWLTEAWT SFIDLLKHAE 240
  241 TIDILIMVLG YLSMHLTFVS LFLSMRRLGS KSWLAATVLI SGGFAFLFGL LVTTKLGVPI 300
  301 NMVLLSEGLP FLVVTIGFEK PIILTKAVLS ASLGGSSQSA AGQGSDARKA PPVRSIQDAI 360
  361 QHAVKNKGFE IVRDYCIEIG ILVIGAASGV QGGLRQFCFL AAWILFFDCA LLFTFYTTIL 420
  421 CIKLEINRIK RHVALRKALE EDGITRRVAE NVASSNDWPR VNGGENGQGS NVSSSGIFGK 480
  481 KVRASSVPKF KFLMVGGFVL VNVLNLCTIP FRSRQDGQIM PALAKLSNVL APAPIDPFKV 540
  541 AENGLDAIYV NAKSQGLETV VTVLPPIKYK LEYPSVHYAE PDTSVFDIEY TDVVGGRVIE 600
  601 SLLKSLDDPI ISKWIIAALT LSLVLNGYLF NAARWSIKEP ETEKEPEKQQ PEPLPKPVVV 660
  661 RQPVVKADGS VRTREECEQM LKDKLAYLLD DEELIDLSIR GKIPGYALEK TMECEGMSRT 720
  721 DAFTRAVKIR RAVVSRNAST SATTGSLEYS KVPYQHYNYS LVHGACCENV IGYLPLPLGV 780
  781 AGPLTIDGQS FFIPMATTEG VLIASTSRGC KAINAGGGAV TVITGDGMTR GPCVGFPSLA 840
  841 RAGAAKVWLD SEEGQTVMKN AFNSTSRFAR LQSMKTALAG TYLYIRFKTT TGDAMGMNMI 900
  901 SKGVEKALHV MATEAGFEDM ATISVSGNFC TDKKPAAVNW IDGRGKSVVA EAVIPGDVVK 960
  961 SVLKSNVDAL VELNISKNLI GSAMAGSVGG FNAHASNIVT ALFLATGQDP AQNVESSNCI1020
 1021 TIMKNVNGNL HISVSMPSIE VGTIGGGTIL EAQSAMLELL GVRGSHPTTP GDNARRLARI1080
 1081 VGAAVLAGEL SLCSALAAGH LVRAHMAHNR AAPPPTRSMT PVSAAVATTL TDKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle