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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119188523, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRNALRQSS RTVTAVSATG RIATVRAGTP SPLASVSKQV RSYAAEAKAA PTEVSSILEQ  60
   61 RIRGVQEEAG LAETGRVLSV GDGIARVHGM TNVQAEELVE FASGVKGMCM NLEAGQVGVV 120
  121 LFGSDRLVKE GETVKRTGEI VDVPVGPEML GRVVDALGNP IDGKGPIKTT EKRRAQLKAP 180
  181 GILPRKSVNQ PVQTGLKSVD SMVPIGRGQR ELIIGDRQTG KTAVALDAML NQKRWNNSSD 240
  241 ETKKLYCVYV AVGQKRSTVA QLVKTLEEND AMKYCIVVAA TASEAAPLQY IAPFTGCAMG 300
  301 EWFRDNGRHA LIIYDDLSKQ AVAYRQMSLL LRRPPGREAY PGDVFYLHSR LLERAAKLND 360
  361 KHGGGSLTAL PVIETQGGDV SAYIPTNVIS ITDGQIFLES ELFYKGIRPA INVGLSVSRV 420
  421 GSSAQLKAMK QVAGSLKLFL AQYREVAAFA QFGSDLDAST KQTLNRGERL TELLKQKQYS 480
  481 PMAVNEMVPL IYAGVNGHLD SIPVKKILQW EADFLAHLKA NEAEVLEKID KEGQLSKDLE 540
  541 AQLKDIIVAF NKSFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle