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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119187351, gi...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPQDNITAP PVCAPEEKSG LSAAAAELND QVSREASRTA PPSQTPASAD DNQAADVDQA  60
   61 KLAIPVQKRR RVTRACDECR RKKIKCDGKQ PCTHCTVYSY ACTYDQPSNR RRNPAPQYIE 120
  121 ALEARLQKAE ALLRAVLPDV DLDDPSFDAS NVGELVSTLT KPKSEPNPER ERKESSSSEH 180
  181 CDESLLESMV DNTGALDLDD QGHWDYHGQS SGLMFVRHLR KQFGNLVPER TPSKFQQISQ 240
  241 ILESAKSSSE SPIDTYMSLA HDLPPRDIAR KLCDNALEDA CIVLRFMHKP TFYAMFDRIY 300
  301 DTPAEQYTNK ENTFLPLLYL ALAVGCLFRG VGDSTLDKSG YEPAVDQGFQ YFKAGRLLLD 360
  361 ITECRDLTSL QAICFMILFL QASANISTCY SYIGIALRAS LRLGLHRSVS ANFNPVELES 420
  421 RKRVFWVVRS MDIHVSTILG LPWMLSEDDI DQDPPLGIED EYITPEGILP VPPGSASLMA 480
  481 GVNAHIRLAQ ILLKVTKYIY PVKAANLGSS HTYMVSHSKI REIERDLQDW KDDLPESLKP 540
  541 GSEASPKVDR LRQLLRISYA HVQMAMYRPF LHYVSGGSHG RGIDKRSYAC AAACVSVARN 600
  601 VVHITAEMKK KQLLNGSYWF TMYTTYFAIL SLLFFILENP ESASAKDGIL KDALEGKNTL 660
  661 AGLAKRSMAA DRCTQSLNAI FKHLPERLRN RRANVPVPIN RKRPQPAALQ TTSTPKLAGT 720
  721 LTPPSVQKET EGLPFNSVKR SNTFPIQATA NAQKQPQQAM VQSHIEESKA TASQTLSQSP 780
  781 TTVPQPTSIL PSTSDKETSQ ISTPSSPLSA GQQAQSTPLK QPISFSPPFD NPSRLPDLMP 840
  841 MMFPSDDPFA YPNQPMSLLE DAQFKQDSID ISRQFPFRPG HTMSTGLEAS TPTRTTASSP 900
  901 GGFINPPNFS GFSNQDLSNL TGMTSRPKGL SGFPARHERR LSESAPDASA PGYVENPDLV 960
  961 TMPGQAFLWQ NLGTQGPGSN FFPHSASEDT FTNGTGDFSM PMDIGMVGFN TLGMGMGLGS1020
 1021 TMGYDNQFDN AGMDSVSGLN PDWAQWSSWH MGTEGEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle