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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119186627, gi...
Protein type: Transmembrane
Type Confidence: 0.50
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMFAISQYI CSSRCTLRLF RSLCGSSMLG ASAYTVLSCS RSSSYFTLFP KFSRPLSTEP  60
   61 TPNPPRQDGG LPPGYNSAKH HNVPHTSTQT SNSSNSSIVG SWKDSDWEEN PDFSISSFAE 120
  121 LPTRDFGSNQ HMIINQEFKE ALRQILWQFR APIRYAFAYG SGVFPQSGTA TGESCHPAAP 180
  181 PTIQRMQQGG GKMIDFIFGV SYSQHWHSLN LNQHRDHYSA IGSLGSYVVS QVQDKWGAGV 240
  241 YFNPYVTVNG TLIKYGVVNI DTMCKDLSEW DTLYIAGRLH KPVKILRDHP RVRLANQMNL 300
  301 LSAVRVALLL LPPDFTESQL YTTIAGISYM GDPRMSFGSE DPKKITNIVS AQMANFRRLY 360
  361 APLIDTLPNV AFNDPSCSDP DWIDNPEANV KLAQDMDPVK RGNMVRRLPQ SFREKLYFST 420
  421 SPAFDRRLFE EDHLKEEVAK SIKKTISWPS TSQSIKGIVT AGFRRMFRYL KEKRDKYSKS 480
  481 KASSSTDHDD STNKSKPD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle