YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90302606, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYYTLVFL ILMVEMAIFM GLIVPLPFTW KRKLFTFISE SPVIAKLQYG MKITFIFILI  60
   61 LFIDSVNRVY RVQIELSAYS KDAVGAGAGA LGSERMEVQA RKFYSQRNMY LCGFTLFLSL 120
  121 ILNRTYTMIL EILRLEDRVK QFEGSKKAGG EDSARLAAAG DMGEIGRLKK ELAAREKDLE 180
  181 ALKSQSEGLS REYADLSDKY AQEHPDNTPK KER

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.60
Transmembrane Helix	7	29	0.93
Cytoplasmic	30	48	0.59
Transmembrane Helix	49	66	0.79
Non-Cytoplasmic	67	213	0.53