YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148571608, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHIADEKSI KGGQYDKVPE NYSGTVYICP MHPEVRDTEK SDCPICGMFL KPKDEVAESN  60
   61 NNEGSHAHCH KADANNSTEL KSVEGNKYDK IPENYNGTIY ICPMHPEVRD VEKSDCPICG 120
  121 MFLKPEDEVA KDDSHASCHG KDTDSSGVKS VKGGKYDKVP ADYDGTVYTC PMHPEVRDVR 180
  181 NSGCPICGMA LEPETLTIGE EDTSELDDMT RRFWICTVLT VPLLIYVMSG MFDLNVVNFS 240
  241 QYGISSKILQ WAELVLATPV VLWGAAPFFV RGWQSIKSRN LNMFTLIAIG VGAAYIFSIV 300
  301 ATFFPDIFPD SFRDASGQVG VYYEAAAVIV TLVLLGQVLE LKARSQTSGA IRALLELAPP 360
  361 TARRVDENGE EVEVSLDEVV TGDKLRVKPG EKLPVDGTVI DGNSNVDESM VTGEPIPVSK 420
  421 VAGDTVTGGT VNGTGTLLVE AVNVGADSVL SKIVQMVAEA QRSRAPIQRL VDQVAGWFVP 480
  481 IVIVSSIITF IVWAIFGPEP AMTYALVNAI AVLIIACPCA LGLATPMSIM VGTGKGAQNG 540
  541 VLIKNAEALE SMEKVDTIVV DKTGTLTAGK PELTAIDAQV GQDEDEFLAL VASVESASEH 600
  601 PLAEAIVRAA QERSLIIPKA TDFNSTTGEG VQAVVDGKKV AIGNSKLMES LNSFDNELST 660
  661 KADVRRKDGE TAMFVAIDGK AAGIISVADP IKPSTKEAIS LLHDAGLKVV MLTGDNEKTA 720
  721 QAVANKLGID EVHADVSPED KNRIVKEMQD SGKLVAMAGD GINDAPALAQ ANVGIAMGTG 780
  781 TDVAMESAGI TLLKGDLMGI AKAYKLSHAT MRNIRQNLFF AFIYNALGVP IAAGVLYPIF 840
  841 GLLLSPMIAA AAMSLSSFSV IANALRLRRL KL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle