YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91228704, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKGDVNRA INAYWCVVAG SEIWLVDGAV PFGSAEQLSL PVTSARPIGE YSGSPVMWLN  60
   61 LADLEHDLPL VSLRDCLHFP EPLFMLLSKA VQYGHMTQSL RFCPQCGGRN FLNNNQLAMQ 120
  121 CGECRTLHYP RIFPCIIVAV RKENQILLAQ HPRHRNGMYT VIAGFLEVGE TLEECVAREI 180
  181 HEETGILVKN IRYFGSQPWA FPSSMMMGFL ADYESGELSP DYTELSDAQW FGIDEMPPVA 240
  241 PKGTIARALI EQTLKDIDSN CLINR

Type	Start	End	Confidence
Cytoplasmic	1	10	0.53
Transmembrane Helix	11	30	0.52
Non-Cytoplasmic	31	265	0.98