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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91188319, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.68
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLATASIGR KLLLSFIAMA ILVMLSALIG VSGFSLVAKT ERNVVDSAIP AMIEARQVSE  60
   61 LSTRIISSVQ MLSNARNEQE RKESGRVLFE QLESLLTHIK ELGSESFDSQ LLEALENNVQ 120
  121 NVIDNLAELG VSVEKKLWLA KEIDTRVEEM RLLSEELEQL TRTQVQNTST IAVANVTHIY 180
  181 DLLESNKKSQ VYQALDALVE VDLDLTERLH ELHLLAFKML NQIEEARTLT NIERIQQVQS 240
  241 DFDSNLKIMQ RRVLAVEDPT RSKQMSQLLI ELGKRQVVFS ILMQQYENNE QSQQLMQKTL 300
  301 ELFSELNGTV NKLVDDSNKT TTVAVDQLTS TLKFAQWSLT VISIVGLIVL VLILWRVVYL 360
  361 SVVKRLAEYS AALLSVAQGN LAVELEVKGK DELAHMGQAI ITARNTAQAL KVVAEGEAQA 420
  421 KRELEEHKEH LEELVEQRTS QLKQANRRLN EEVLNHAKAR KQAEQASRAK SAFLATMSHE 480
  481 IRTPMNGVLG TARLLIDSGL NPIQKRYAEI INRSGKTLLA ILNDVLDYSK IEAGHLEIRH 540
  541 MGFDLHQMVE DTFQLMNSRA QEKKLLFSYH IESDVSRYWK GDVTRISQVL NNLVGNAIKF 600
  601 TDEGEIDIYV SLNPEDESQV LFEVSDTGIG IAKKYQRTLF DAFTQAEGGM SQTGGTGLGL 660
  661 AISKRIIEAM GGVLEVDSEE GNGSRFWFSI PLEESEPIET GTVATARCKV KAKVLLVEDN 720
  721 EVNRVVAEGF LESMGHQVVM AENGSQAEQL ISTQDFDIAL VDINLPDCDG TELIQRLKRI 780
  781 ECDKPANKAL AVTPMIAVSA HVFAEEVERY LAAGFDGYLP KPLAKEALAA LIQDALDGKP 840
  841 LLLPQNADCT PFDQISPQEQ ELQSKVVQAP KTKEPDVVII NPSVIESDMK ILGRDKMLHI 900
  901 INLFRATSTD VLSKLQASAE DNDSKEVKNL AHKLKGSAGS LGLTALMNAC QAIEAAPQPL 960
  961 DTYNATKDDL VSQVSASIQA LDELMAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle