YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91225891, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQELRFVLIV VGALAIAALL FHGLWSSKKE GKAKFGNKPL GKLDVNQEDK NDLVEKERDF  60
   61 APAPEDDFEI IRKDRKEPDF GMASSFDNKF ESDPLFGGPS EVKQTQQEPD DIPSFVAEKD 120
  121 KEEDVEPVVQ ATVAEEPFQP AVEEDAIPAA FDITEKEQQV ETVSEPVVAE PKEEPKPEPE 180
  181 MQVIVLNVHC AGEEPFVGTA LFESMQQNGL IYGEMDIFHR HVDLSGNGKV LFSVANMMHP 240
  241 GTFEHADPAE FTTKGISFFM TLPCYGEAEQ NFNLMLRTAQ QIADDLGGNV LDDQRNLMTP 300
  301 DRLASYRRQI VEFNAANA

Type	Start	End	Confidence
Signal Peptide	1	26	0.86
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	318	0.95