YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91190222, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNRQRGVAL IIVLMLLAIM ATVAASMSER LFLQFQRGAN QINYQQAYWY SLGVEALAKV  60
   61 GIEQSYKDTD TINMSQPWAI KEQVYPLDYG QAAGRIRDKQ ACFNLNVLSR VQPTGQQITR 120
  121 PYLVNVLQRL LEELDVEPYQ AEIIADSTWE YIDADDSVRS TTGVEDSTYE AMKPSYLASN 180
  181 GWMADASELR AVYQVSGEIF QKLEPLVCAL PSDDWRLNVN TIDVEQAPIL VAMFSPNLSS 240
  241 SDAIQLIEKR PFDGWDSIDE FLAESEMAGL SEDVKKNAKG YLGVDSAFFE LDAQVLVDES 300
  301 RVRIRSLLQS TNRETVTVVR RRFGGISERV SDRSAE

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	336	0.99