YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91224975, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRNNHPRAN TRQRVKGFTL IEVLVSIAIF ASLSVAAYQV VSQVQRSNAL SQERTQRLNE  60
   61 IQRAMVMMDN DFRQMAMRQT RTNGEEPSSR LIFWSDYLLD SDTKGLMFAR LGWHNPQQQF 120
  121 PRGEVTKVGY RLKEETLQRV WWHYPDTPVG QQGTVTPLLT QVESFDMRFY DGKQWKKEWA 180
  181 EEKALPKAVS VVLTLKDYGE IARTYLTPDG TLSQKEESSG DSNNG

Type	Start	End	Confidence
Cytoplasmic	1	17	0.85
Transmembrane Helix	18	38	0.84
Non-Cytoplasmic	39	225	0.99