YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91190218, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFKRSKQQG FTLLEVMVVV VILGILASFV VPNLLGNKEK ADQQKAITDI VALENALDMY  60
   61 KLDNSVYPTT DQGLEALVSK PSNPEPRNYR DGGYIKRLPN DPWGNQYQYL SPGDNGTIDI 120
  121 FTLGADGQEG GEGPAADIGN WNMQDFQ

Type	Start	End	Confidence
Cytoplasmic	1	10	0.72
Transmembrane Helix	11	31	0.74
Non-Cytoplasmic	32	147	0.95