YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91223735, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIALTLAA TSITLVSYSA FSAQDGEHVR LATTTSTYHS GLLDYLLPQF EKDTGYKVDV  60
   61 IAAGTGKALK MGENGDVDLV MTHAPKAEGA FVEKGYGVLP RKLMYNDFVI VGPKADPATI 120
  121 KNDEGVLDVF KEIANKNATF ISRGDDSGTH KKEMGFWAQT KIEPNFGGYR SVGQGMGPTL 180
  181 NMASEMQGYT MTDRGTWLAY QNKLDLEILF QGDEKLFNPY QVILVNPERY PTINYQGAKA 240
  241 FSDWLVNPRG QGLINGFRLN GKQLFVANAE SK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	272	0.99