YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91191523, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWLVAFAS LLILAGCEQP ADQIHLSGPT MGTSYNIKYI EQDGIPTPKA MQTEIDRLLE  60
   61 EVNDQMSTYR DDSELSRFNQ HQTSEPFTVS TQTATVVKEA IRLNGLTLGA LDVTVGPLVN 120
  121 LWGFGPEARP DVVPTDEELA ARKANTGIHH LSVDGNTLSK DLPNLYVDLS TIAKGWGVDV 180
  181 VADYLQSEGV QNFMVEVGGE MRLKGVNREG VPWRIAIEKP TVDERSIQEI IEPGDMAIAT 240
  241 SGDYRNYFES NGVRYSHIIN PRTGKPIHHK VVSVTVLDKS SMTADGLATG LMVLGEDKGM 300
  301 AIANENNIPV FMIVKTEDGF KELASEAYKP FMKK

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	334	0.99