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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|146155118, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKKIFSFLF STRLMAVLFL TFAIAMGVGT FIESKYNTDT ARILIYNTWW FEAIMLVFVI  60
   61 NFFGNIKRYQ LHKKEKWATL LLHIAFIFII LGAFITRYIS YEGMMPIREG AAENQIYSDK 120
  121 TFLTVFVDGE YKGEMKRRVF EKSLLLSPVT NNDFSIDGKF DQTPFEVTYS KYIMGAKEVV 180
  181 KEDPNGILYL KLVEAGAGGR EEHYLKEGEV QNIHNVLFAL NKPTDGAINI NTTGKEYTIQ 240
  241 TPFEGEFMRM ADQFKGKVTK DNVQPLMMRS LYSIGDIRIV FPEPPIKGKV DYESNNDFKA 300
  301 KSHTDALIVK VKAEGQEKEV MLMGSKGSIG EPKTVKIGNI EYSLFYGSKA YVLPFKIKLN 360
  361 DFIADKYPGT EKSYSAFKSK VTVQDSTETF DADIFMNHVL DHKGYRFFQS SFDPDEKGTV 420
  421 LSVNHDFWGT NITYLGYFLL YIGLMAIMFT KHSRFGDLKK KLEAIQKKKE KLIKILVLFI 480
  481 ALNGLSGFAQ EAPHVHTPGH VHEHEHNHST DPNDHANHVT APPSQKQLDS LLNIYKAPES 540
  541 HAAKFGRLII QDAGGRMKPI NTFSSELLRK VSHSDKYNGM NSDQVFLSMT QYGQVWIQIP 600
  601 LIYIKSGNDS IRKIIGIDSK DQYAPFIKFF DQQGNYKLSP YLDAAYKAAN PNNFEKDFVE 660
  661 TDKKVNLMES ALSGSILKIF PIPNDPNHKW VSYLERDNNN FKGMDSTYVK QILPLYFSAL 720
  721 NNASISKNWD TADQLVESIN GFQKKFGAKV RPSEDKIDAE IAYNKYDVFK VLPYWYITAS 780
  781 ILMLMFTILN IFFEKKWLRI TVNGFHIIVG LLFVLHTLAL IARWYISGHA PWSNAYESIV 840
  841 YVAWSTMFFG LAFDRKSKLT VASSAFVTAM ILMAAYMNWI DPEIANLQPV LNSYWLMIHV 900
  901 AVIVASYGPT ALGMILGFVA LVLIFFTNEK NKAKMDLHIK EVSYINEMAL TIGLIMLTIG 960
  961 NFLGGQWANE SWGRYWGWDP KETWALISIM VYAFVIHARF VPALRGKWFF NLMSMFAFIS1020
 1021 ILFTYYGVNF HLVGLHSYAS GEAHSLNWIY YCLAVISVIG AVTYPKYRKY YKKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle