YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|146300857, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHNFLRKGF VFISVIAGFS GYAQDLKLQY NQPAVEWTEA LPIGNGTLGA MVFGRVDSEL  60
   61 IQLNEATLWS GGPVQKNVNP NAFQNLALIR EALKAEDFDK AYNLTKNMQG AYSESFMPLG 120
  121 DLLLTQDLGS KKTDFYNRSL DIQTGLAVTN FKADGVNYKR EIFASAPAKC IVMKLSADQL 180
  181 KKLSVSIDAS SLLKNQKEIQ NQSLVLKGKA PSHADPNYID YNKEPVIYDD PAGCRGMRFE 240
  241 LIVKPIVKDG TVSYEGNKIV IKNASEIVLF ISAATSFNGF DKCPDSQGKD EHAFAENPIK 300
  301 KASVKKYDIL VKEHLQDFQK FFNRVSLQLN EKETHKSNLP TDIRLEQYAK GEKDAGLEAL 360
  361 FFQYGRYLLI SSSRTHNAPA NLQGIWNNKL RAPWSSNYTT NINLQMNYWP VESASLSELF 420
  421 FPLDDFVKNV SVTGAETAKS YYHANGWVLH HNSDIWATTN PVGDFGKGDP MWANWYMGAN 480
  481 WLSRHLWEHY QYTGDTEYLK KVYPIIKGAA EFSLDWLQQD KNGYLVTMPS TSPENKYFYD 540
  541 GKKGGVVTTA STMDIGIIKD LFENTSQASK ILNIDADFRQ KVDKAANQLL PFQIGAKGQL 600
  601 QEWYKDFEDE DPHHRHTSHL YALHPANLIS PLNTPELAAA AKKTLELRGD DGTGWSLAWK 660
  661 VNMWARLLDG NHAYKLFKNQ LRLTKDNDPK YKRQGGCYPN LFDAHPPFQI DGNFAGTAGV 720
  721 IEMLMQSQNN EIHLLPALPD DWKEGEIKGI TAKGNFTVNI KWNDGKMSQT KIVSNNGGTC 780
  781 KIRSSEPFVI EKLNIKSEKS SIGYTAVFET KKGTSYIINP LQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle