YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90418821, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METALTVVVG CIFAVAFYLL LSKHIIRMLL GVVLLGNAVN LLIFTVGRLG PIAPPIIPTE  60
   61 LAMPDGPIAN PLPQALILTA IVISFSFFAF LLVLTYRAYQ DLGTDDTDQM RIAEPEDQGL 120
  121 PPLGY

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.82
Transmembrane Helix	4	22	0.81
Cytoplasmic	23	28	0.76
Transmembrane Helix	29	52	0.84
Non-Cytoplasmic	53	71	0.91
Transmembrane Helix	72	94	0.90
Cytoplasmic	95	125	0.94