YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90581599, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQYDVIVAG GGMVGAATAL GLAKLGLDVA VLEGLAPRPF ADTQPMDLRV SAISPHSVAL  60
   61 LERLGAWNEV LNMRLCPFKR LETWESPECR TRFNADDMGL EQLGYIVENR LLQLALWQQF 120
  121 DKIENLTLYC PSKMVSTTPI ENGYIVELEN TQQLQCRLLI GADGANSQVR QQAGIGITAW 180
  181 DYRQHCMLIN IETALPQQDI TWQQFTPAGP RSFLPLPGHQ GSLVWYDSPE RIRRLSHMPS 240
  241 EQLHAEISAV FPEELGEFSV VDHGSFPLTR RHAQTYYKPN VVLLGDAAHT INPLAGQGVN 300
  301 LGFKDVDVLL QEIEAAGEYW AESSTLDKYQ RRRRPDNLVM QTGMDFFYMA FSNNIGPLKF 360
  361 IRNAGLRLAD EAGGIKKQVL KYAMGL

Type	Start	End	Confidence
Signal Peptide	1	21	0.54
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	386	0.97