YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90581263, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRKPYVRE MKRTWWKDSS FYRFYMIREA TVLPLIFFTI CLTFGLGSLV KGPEAWQGWL  60
   61 DFMANPIVII LNILALAGSL FHAFTYFNMM PQVVPIRIKG KLLDKKIIIL AQWAVVAVIT 120
  121 LFVLAIV

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	46	0.80
Non-Cytoplasmic	47	65	0.82
Transmembrane Helix	66	86	0.95
Cytoplasmic	87	106	0.90
Transmembrane Helix	107	126	0.96
Non-Cytoplasmic	127	127	0.99