YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89049778, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQKQRGFTL LEVMVVIVIL GVLASLVVPN LLGNKEKADQ QKVVTDISAL EQSLEMYKLD  60
   61 NSVYPTTDQG LEALVTKPSS SPEPRNYRDG GYIKRLPKDP WGYEYHYVAP GEHGAIDIFS 120
  121 LGADGQEGGD GVNTDIGNWN MLDYNKK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.54
Transmembrane Helix	8	28	0.63
Non-Cytoplasmic	29	147	0.86