YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90438177, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLSKITLAP SATLAETLLM LQRNDAYAAH QLLWQLFHQQ SERQFIYRQE LMPNGLPVFW  60
   61 VLSRFAPDET NAQWQIQTKP FTPQLTAGQR LAFKLRANPT VWNNTTKKRH DVMMHAKYQA 120
  121 RQQDIGAEML SHYMQQAAQQ WLCDPNRLEQ WGISLDVLPD IEAYTQHQSD KKMKQRIQFS 180
  181 SVDYQGVLTI QSPEKFLTQY QQGFGRAKAL GCGLMLIRGI

Type	Start	End	Confidence
Signal Peptide	1	28	0.75
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	220	0.99