YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90580619, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAFIVLSIT PLVLSALYFL NSHTKDLAEQ SINHLASLRD NKQKQLYSFF AAKESEVKSF  60
   61 ARSELSNNSG GRFYGLVGAY HQLGDIDQQL ASQGHANYFS QTLTKKNESH NKTTYVGHER 120
  121 YRLMYKRYNA VYKEYLKRSD FKDIMLVDRS GNVVYSVHNH QLFGVNLLTN AQVSPALKQT 180
  181 FEAITEKTKQ SQAKPDQVPV TFTDFSQSTN TDDTTAWFAA PIIQQGYLHS YVFMELSNKA 240
  241 ISELVQDLGN NANYVQTLLI GQDHKLRFSA ETGVPTTLKS ESISEALAGK SGVGSFKNYD 300
  301 NISVLSAFSP LDILNNKWAL VVELPEKEAF ARITELEKIF GVAMISAIIL VIFASHLLSN 360
  361 SITAPLLRLT WAAEKASGGD LDQVIEGTER SDEIGRLAIS FSRMQRSIRE KIGLIKTQND 420
  421 ELEQSLKIIK QKNNELQTAD KLKDEFLATT SHELRTPLHG MVGIAESLLA GANGPVKDSQ 480
  481 RRQLEMIINS GQRLTNLVDD LLDYHKMRYG DLDIHRHAID LSAAVRLVLE LSSHLLGNKP 540
  541 VRIINQIPAN LPLVDADEQR LEQVLYNLVG NAIKYTSEGK IIISATVLEQ QLRVQVVDTG 600
  601 QGIPSEQLEH IFEPLIQANS NSANYRQGAG LGLSISRQLI ELMGGRLYVS SQPMIGTTFS 660
  661 FTLNLATNEQ INAISNDSIL QHFQVPSLDS RSCESTNLPE NPEGDLILVV DDEPVNLQIL 720
  721 NNFLRLAGYR VKTAESGHQA LDIVQQQRPD LILLDIMMPE MSGYEVCTLL RKQYSIFELP 780
  781 IMMLSALGQI QDRIKGFECG ANDYLTKPFN KEELIARIQA YLQASKTEHE KQKNQSLQQE 840
  841 IHRREQVEIS LIEAQSRLLG LLDSTNEAII CVQSEGRIRY VNSAAGKLFK RSPEQLERHT 900
  901 ISDIIAAELP ISINDSHHYN GKLSFIINDE IQTLSTDIIN LPEESGLKQM FVFDNQGPSA 960
  961 DHRIGLLENA VDMLSEFAFN GDKNNLQQLR ELGGEFTRLA DKLDGSGQNK GDLIRQLMVE1020
 1021 SMTMTLSLWE NDAKKTKFEL AEESGLWRVY LDRSTLQTRT LDKYLHIDTL PKTPRWRTVI1080
 1081 NTMDYVLERC TQTTVERQHV VAMRDKLHHT ISTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle