YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90580542, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTALKQSL TVKQSGIRWL WLAVLVFIID NGTKLLVMDT MGYGWPNRIE VLPFFNLLYV  60
   61 HNTGAAFSFL SDASGWQRWL FAAIAFGVCG LLMYWMRRTP ATNKIANIAY ALIIGGALGN 120
  121 LFDRMYHGFV VDFLDLYYGS YHWPAFNIAD SAICVGAALL ILDGFKSDKQ AKS

Type	Start	End	Confidence
Cytoplasmic	1	16	0.91
Transmembrane Helix	17	37	0.91
Non-Cytoplasmic	38	75	0.90
Transmembrane Helix	76	96	0.93
Cytoplasmic	97	105	0.86
Transmembrane Helix	106	126	0.89
Non-Cytoplasmic	127	142	0.91
Transmembrane Helix	143	165	0.88
Cytoplasmic	166	173	0.96