YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90438511, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNAPVSKGR RRFLTVTTSV VGGLGAAAVA VPFIKSWNPS AKAKAAGAPV EVDISKLEDG  60
   61 QMVRVEWRGK PVWVVRRSKA VLQELSTHDG ELRDPSSEEP QQPSYAQNEF RSVKPEIFLA 120
  121 LGICTHLGCS PTYLPNSFNE QVNGVSSGFF CPCHGSTFDM AGRVFAGVPA PLNLVIPPYQ 180
  181 FLDDNTIIVG VDGEAV

Type	Start	End	Confidence
Signal Peptide	1	30	0.83
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	196	0.99