YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90439029, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTLYRDPK KGKLGGVCAG LAEYFGVEIW LVRILAVSAF LLGLGFFATI AYIAAWLILD  60
   61 KMPPQRKEQQ DTYTEHNVKQ KPWQAGRSAH QILQKVESEF DTAEKKVQQM EAYVTSSAFK 120
  121 VDREFNKL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.75
Transmembrane Helix	12	32	0.62
Non-Cytoplasmic	33	36	0.58
Transmembrane Helix	37	59	0.90
Cytoplasmic	60	128	0.89