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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90579232, gi|...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAIFTGIGA FFRTIWKLIN FARKFILNLI FLLIVGAIIF AFSDNDDSAE KPEASALVLN  60
   61 LSGPIVEQKN YDNPLDSVIS DVMGQPPVEQ NVLFDIVEAI RTATTDSSIT GLVLNLKNMP 120
  121 ETSLTKLRYI AKAIQEFKAS GKPVYAYGGH YSQSQYYLAS YADKIFMSPD GGIMLTGYGT 180
  181 YTLYYKTLLE KLDVTTHVFR VGTYKSFVEP YIRDGMSAAA KEANTVWLDQ LWDAYTSDVA 240
  241 KNRNIDAKSL TPEMNSFVEQ LTAVNGDFAQ LSKKMGLVDQ LVTRPQLSQI LIKEFGDNGE 300
  301 HSFKQISYYD YLSMLVDDQK PSNNKVAVVV ASGAIVDGKS SQGTAGGDTI AALLRKARFD 360
  361 NDVKSVILRV DSPGGSAFAS EVIRNEVDAL KAAGKPVVVS MSSVAASGGY WISSSADKII 420
  421 AQPTTITGSI GIFAILTTFE KSLEKLGVYS DGVGTTPFSG VGVTRALPEN VGKVFQLGVD 480
  481 NGYQRFIGLV SKYRHMSLEQ ADKIAQGRVW TGKDAKERGL VDELGDFDTA ITEAVSLAKV 540
  541 DDYQLVWMQQ PLSPIQQFFK EMSGEVKAQV VSMVLGDTPN AFAPVTKVAK DLTSLSNFND 600
  601 PNGRYAFCLN CSTVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle