YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90579153, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNKELMTN GLWSNNPAVV QLLGLCPLLA VSSTVTNALG LGLATTLVLI GSNLIVSLIR  60
   61 HWVPTEIRIP VFVMIIASLV TCVQLLMNAF TFGLYKSLGI FIALIVTNCI IIGRAEAFAS 120
  121 KNAPLPAVLD GLWMGLGMTS ALFILGAMRE LLSKGTLFDG ADRLLGSWAS VLRIQVFHFD 180
  181 SGFLLAMLPP GAFLGVGLMI AAKNVIDKRR QQKQPKEESK PTVERARVTT VD

Type	Start	End	Confidence
Cytoplasmic	1	11	0.84
Transmembrane Helix	12	31	0.86
Non-Cytoplasmic	32	37	0.69
Transmembrane Helix	38	59	0.89
Cytoplasmic	60	68	0.77
Transmembrane Helix	69	90	0.89
Non-Cytoplasmic	91	96	0.65
Transmembrane Helix	97	118	0.85
Cytoplasmic	119	126	0.88
Transmembrane Helix	127	148	0.90
Non-Cytoplasmic	149	181	0.91
Transmembrane Helix	182	202	0.91
Cytoplasmic	203	232	0.93