YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90439755, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSIPNILS FVRLMLIPFF VIAFYVPYEW SAFATALIFW VAGVTDWFDG YLARKLNQTT  60
   61 RFGAFIDPVA DKLMVATALV LVVEHYHSVW VTIPAVTMIG REIIISALRE WMAEIGKRAS 120
  121 VAVSWVGKVK TASQMFALLL LLWHPHEYVV WLGYVSLYVA MVLTYWSMVQ YLKAAKGDLL 180
  181 NAENH

Type	Start	End	Confidence
Cytoplasmic	1	8	0.93
Transmembrane Helix	9	43	0.76
Non-Cytoplasmic	44	85	0.46
Transmembrane Helix	86	105	0.65
Cytoplasmic	106	125	0.64
Transmembrane Helix	126	143	0.73
Non-Cytoplasmic	144	149	0.71
Transmembrane Helix	150	169	0.92
Cytoplasmic	170	185	0.89