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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90440894, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMFDYFLYY LYGLRVVLFV TMVILCICGI DDLFIDLYYW IRHFWRKGTV YKRYSRKNVD  60
   61 DLYQKEEQPL AIMVPAWQEF GVIDKMAELA ASRLDYENYQ IFVGTYPNDP ETQADVDRVC 120
  121 ARFPNVHKVV CARPGPTSKA DCLNNIISSI IEFEKKAKIE FSGFILHDSE DIVSPMELRL 180
  181 YNYLLPEKDL IQLPVYPYTR KWYQMTPGHY ADEFAELHGK DVVVREAIAG QVPSAGVGTC 240
  241 FSRKAILKLL VAGDGLPFDV QSLTEDYDIG LRLKQWGMNE IFVRFPIIDK DQATLKEDSF 300
  301 GVSLHDGNVV CVREYFPTTF STAVRQKSRW IIGIVFQGFK NTKWTSDWKL NYFLWRDRRG 360
  361 FINNTIGFLS MLIFLQLVGL TIYSYLVKDG YHFLSIIADD RTTHILLVIN TLLLINRLFQ 420
  421 RFFFVSQYYG YLEGVLSLLR LCWGTVINFA ANVRAIRQVI QQGDARRVAW DKTTHDFPSI 480
  481 QDEVRKKPIG EILKENKKIS EEMLNSVLIN MPKDRLLGSY LVEQGIVSND DLSKAIAEQF 540
  541 ESEFEHCDPF DLDPALIELL PKKLALKYSV LPLRKDGEML VLGKEMPLSP VALATIERRL 600
  601 KCPVKSVITT NGAVTLGLRY WYLEQKEINP HKVIEETVGK KSLTQEAYNT LIDQYFATQS 660
  661 QLGQCLLMSR QIESAVLNQA ILAYEKEHEQ SFGAFLIKHH YVTKEAIDKA LELQVSQQMN 720
  721 VNHLINECKQ Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle