YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90577548, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLFDQLIN QASNYMDKGK ATSNSSTSDL LKGATAGGVV GALLGNKKSR KLAKKYGGKA  60
   61 ALIGGTAVIG TVAYQAYKKW SQESSHASNT AMDSQSAISS NTQLRTNQDL LVQAMIFAAK 120
  121 ADGHIDEQEK TAIAQWMIEN GITHDIETVI VRWLNAPLDP QVIAAQVSGL EQASEVYLVT 180
  181 LLAIDVDHFL ERAYLDALAN ALKLPEGLVQ RIEEQANVM

Type	Start	End	Confidence
Cytoplasmic	1	55	0.70
Transmembrane Helix	56	77	0.68
Non-Cytoplasmic	78	219	0.99