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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86439693
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAARGRRC RGAVLLLLAA SVLAPLVLYG RFPVSPLPDS AGTGAFDRGD GSGSNLVWPH  60
   61 MAASEVSLAK DLTIERLGEH KNRVLSATDD WQAVEVARSH PSEKKIDTWE DPASRDAHQV 120
  121 VAVGNDSAQS TQDDMIKEVV STDGRADGFR DPGDSKEAEE QDGQGMDEKE LQDATELEHK 180
  181 DGSGASENNI AGTDTAGNLT LSLNKESAAD TSSDQTTHAS TNADLATSAS STYHSATSPD 240
  241 ATIRIIKDQL IRAKTYLGVL ASRGNHGTAK ELRARMKDIQ RALGDATDDG MLRQNVHGKI 300
  301 KAMEQTLGRI KRMHDGCSGA VNRLRTSLHS TEERLQSHRK DANYLAQLAA KSLPKGLHCL 360
  361 PLRLTNEYYS SNSNNKDFPN TEKLEDPELH HYAVFSDNVL AAAVVVNSTL VHAKKPANHV 420
  421 FHIVTDRLNY AAMKMWFLAN PLGEAAVQVQ NIEEFTWLNS SYSPVLKQLE SSSMIDYYFG 480
  481 SGKARPGENP KFRNPKYLSI LNHLRFYLPE IFPKLNKVLF LDDDTVVQQD LSALWSMDLK 540
  541 GKVNGAVETC GESFHRFDKY LNFSNPLIAS NFDPHACGWA YGMNMFDLSE WRKQNITDVY 600
  601 HTWQNLNEDR LLWKLGSLPA GLVTFWNHTF PLDRSWHLLG LGYNPNVNEK EIRRASVIHY 660
  661 NGNLKPWLEI GLSKYRKYWS RHVNYDQVFI RECNINP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle