YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90420861, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEKAERRES GGIGETLKVI VQALLLALVI RTFLFQPFSI PSGSMMPTLL VGDYLFVSKW  60
   61 SYGFSQYSMP LSPPLFDGRV MASQPDRGDV VVFRKPREED VDYIKRLVGL PGDRIQVIDG 120
  121 VLTINGKPVE REKVEDFVAE DGTPVPRYRE TLPNGVSYMT LDLSPNSAGD NTREFVVPEG 180
  181 HYFMMGDNRD NSLDSRFDVG YVPFENLVGK AQVIFFSVEG DVSPLEIWKW PTDLRPGRIL 240
  241 TWLG

Type	Start	End	Confidence
Cytoplasmic	1	15	0.86
Transmembrane Helix	16	35	0.84
Non-Cytoplasmic	36	244	0.76