YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90335445, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSDSASSIG AGGVGYVPRR MSRGKFWFAL LACLVGIAIL LGLGSWQVER MQWKQAMLER  60
   61 IDARVHAEPI DLATLRARFA DTGDVDYTPV TVTGRFLHEG ERFMLTTFEG KPGWNVFTPL 120
  121 MTDANAVVFV NRGYVPYEMR DPASRAEGQS EGVVSVTGLA RDPPRETPGY FVPDNEPGND 180
  181 TFFWRDIDAM AEGLTLDAGV TVLPFFVDAG RAETPDGGPI GGTTVIDIPN NHLQYAITWY 240
  241 GLALVLIVMT GMLIVGDLRA ARREAR

Type	Start	End	Confidence
Cytoplasmic	1	25	0.89
Transmembrane Helix	26	46	0.95
Non-Cytoplasmic	47	235	0.89
Transmembrane Helix	236	256	0.94
Cytoplasmic	257	266	0.83