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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90337060, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.29
Topology Confidence: 0.15
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQNFRNFAL WAIIALLLIA LFQLFSNGSQ TAGARDIPYS QFLSDVKSGR VEAVTIQGQR  60
   61 ISGKYSDSSP PFQTYAPEDA QLVERLEAQN VQINASPPGD NSNPIWSMLL SFGPILLILA 120
  121 VWIFLMRQMQ GGAGGKAMGF GKSKAKLLTE AHGRVTFADV AGVDEAKQDL EEVVEFLREP 180
  181 QKFQRLGGKI PRGVLLVGPP GTGKTLLARS VAGEANVPFF TISGSDFVEM FVGVGASRVR 240
  241 DMFEQAKKNS PCIIFIDEID AVGRHRGAGL GGGNDEREQT LNQLLVEMDG FESNEGVILI 300
  301 AATNRPDVLD PALLRPGRFD RQVMVPNPDV GGREKILKVH VRNVPLAPNV NLWTIARGTP 360
  361 GFSGADLANL VNEAALMAAR RSKRLVTMLE FEDAKDKVMM GAERRSMAMT EEEKTLTAYH 420
  421 EAGHALVGII EPFNDPLHKV TIIPRGRALG VTMNLPERDR YGMRKNEMEA RLAMIFGGRA 480
  481 AEEIIYGLDN VTTGASNDIQ QATNMARAMV MEYGMSDKLG RLRYKDNQDE VFLGHSVAHQ 540
  541 QHMSEDTARL IDSEVRGIIE TAENKARNIL NTHIDQLHIL AKGLLEYETL SGDEVRDLLA 600
  601 GKPLARDMGD DTPPSRGSAV PKAGSSRGPD SRAGEAGDSL EPQPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle