YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90336904, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLHDFAVGL FAISVDVALV LLGLAFFFTV IRIMVGPTLP DRVLGLDMLT SVAIGFIAVI  60
   61 GIDTGFTLYV DIAIALGLVG FLATVAFARF IQARGKTEEE RLEALPFRDP QSRHVEPLEE 120
  121 GKTK

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.92
Transmembrane Helix	8	31	0.88
Cytoplasmic	32	42	0.82
Transmembrane Helix	43	62	0.94
Non-Cytoplasmic	63	71	0.65
Transmembrane Helix	72	91	0.95
Cytoplasmic	92	124	0.98