YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90418823, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSLFNLVL ALIWVIVSGS FTLINLLFGF ALGAAALYLI REQVGTVGYI GRAKRIFALI  60
   61 LLFLVELIKS AWRVAVLVLK PRMDLKPGIF AYPLKVESDF EITLLANLIT LTPGTLSVDV 120
  121 SEDRSTLYVH AIDCSDPEAA RADIATGFEA KILEAFR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.78
Transmembrane Helix	10	35	0.85
Non-Cytoplasmic	36	55	0.76
Transmembrane Helix	56	76	0.81
Cytoplasmic	77	157	0.86