YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90416741\|ref\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLILILTAL LAFQSAAASE FDETKALAEQ GVATAQYNLG VMYADGDGVP ENGTEAVKWF  60
   61 KKAADQGDAD AQYTLGYMYA DGLGVPESGT EAVKWFKKAA DQGDADAQYT LGYMYADGLG 120
  121 VPESGTEAVK WFKKAADQGY AAAQYNLGNM YRTGEGVPES AAEAVKWYRK AAGQGDVRAQ 180
  181 YNLGLMYADG DGVPENGAEA VKWYRKAAEQ GDADAQYNLG YMYADGLGVP ENDAEAVKWF 240
  241 RKAAAQGRAD AQSKLGFMYG TGKGVPENSI RAYVWFSMAK TQGDTGAATN IDILKSDMTP 300
  301 QQIADGQALA ATCYESNYKD CD

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	322	0.99