YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90416419\|ref\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKSRCIIL GASHAAAQLA PTLRQQGWTG SISMISNEYA LPYHRPPLSK DYLAGTKTAE  60
   61 QILIRPAAVY SKCNVGITMG VTAAAIDRSN KQLLLDDGMA LDYDKLVLTT GARVRKIDIP 120
  121 GVDLNGVFYL RDLNDAQQIK MFTGANKRAV IIGGGYIGLE TASALRKLGM QVTVLEAMPR 180
  181 ILQRVTAPEV AAFYSRIHAE EGVEIVADVQ AVSISGAKQV ESVQCHDGTE YEADIVIIGV 240
  241 GVIPNTELAE QAGLKIDNGI VVDEYARTSD EDILAAGDCT SHYNPIYQRH LRLESVQNAL 300
  301 DQASVAANTI CGNLKPYSAL PWFWSDQYDL KLQIAGLSQG YTDVVVRGDI DGSRSFAAFY 360
  361 MREGKLLAVD AVNRPQEFMF GKKLIMQGNQ LDTAQLADDS LSLKTLLTS

Type	Start	End	Confidence
Signal Peptide	1	17	0.97
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	409	0.99