YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90416400\|ref\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLIKIKIKK RKDKTMPLES ATAAILAHIA AEAGPELYDM AVTESREMYR EMQPDLPEIV  60
   61 VYSVADTTIE GPAGPIPVRI YRPSAAPAPV HVHFHGGGWV IGDLDTHDRD CREICAGADC 120
  121 IVVAVDYRLA PEHIFPAAPE DCYAALCWAT ANKGLLGGLP GPVSVGGDSA GGNLAAAVAL 180
  181 MARDRNGPAI AMQLLIYPVI DATMESESYR DNADGYLLSR TMMAWFWDLY CPDVDLRADP 240
  241 LASPITAEDL STLPPALMMT AEFDPLRDEG EAYAQRLKAA GVEVEVRRFD GLVHGFFSQA 300
  301 GIIEAAREGV DLAVKALRKA HNRAS

Type	Start	End	Confidence
Signal Peptide	1	33	0.95
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	325	0.99