YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90415141, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKNKVIIAA LMSAFIVGCG ETPNPDDRVN AVSLSKPNFS AMTDVNEKKA AFFAYLMPSV  60
   61 EQENKRVTKE RDFLLKIKAE LDADKSLDSE EIDHARRLSK MYDVSFMSDG VTDSWLSHML 120
  121 LRVDVLPKEL VLSQAANESA WGTSRFATEG NNYFGQWCYR KGCGLVPLAR NEGSTHEVAV 180
  181 FESAYRSVNA YFMNVNRNRA YSELRELRAA QRRAGEQIEG AKLAEGLVRY SERGNAYVTE 240
  241 IQNMIKHNNK YWSQG

Type	Start	End	Confidence
Signal Peptide	1	20	0.94
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	255	0.99