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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90413299, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFNRNGIGG KLLLAFSAMA ALMILAVVIG VAGFSLVAKT EKTVINSAVP ALVEARHLSD  60
   61 LSSRIIFTAQ VLATSKTEHE RQRQGRALTI YIEGLKDSLT ALKSYPFNED LMSQLDDDVK 120
  121 SIIDNLALMG LLVGRQIRLQ AQSDELISDM LVATQQVDSL SQSQVSNAST IAVANVSRIY 180
  181 DLVESGDNQA VYNALDSLVE VDMDLSERLF ELRFLALQVI NMLDDSKRLG DIGNLIRLKE 240
  241 RFIHAVNVMS YRVKSVEDPS RSAQLTELTS NLNRGGVLFG ALEQLLYAKK DVERLDQQNL 300
  301 VLFQQLNSTV DGIITAANEG TQEAVTKVDE TLTVARTTLI SISVIGLAAL VLIMWRFVYA 360
  361 SVICRFNDYS QALLSLARGD LGIQLDIKGD DELAHMGRAI MVARDTASER YRLIQVERKI 420
  421 RHELQLHKES LERLVAQRTS ELEKTNSRLN EEVVNHDKAR NEAEKANRAK SAFLATMSHE 480
  481 IRTPMNGVLG TASLLADTGL NDQQARYLRV INRSGETLLD ILNDILDYSK IEAGHLDIRP 540
  541 VDFSLSELVL DVHNMLESRA LAKHIQLVNH IDDTMNNVWL GDVTRIRQIL INLVGNAIKF 600
  601 TDHGQVTIAV SMNPDMPDEL LFEVTDSGIG IEEAEQDILF NAFKQAEEGR KTIGGTGLGL 660
  661 AISRHIVAAM DGEIGVDSII NVGSCFWFSI PLERGKLSTG IEGSTITIPP AHILLVEDNP 720
  721 VNSMVAEGFL RRLGHSVITA EDGESAEREF NRNVFDMALL DINLPDTDGV TLLHRLRRIE 780
  781 EANGESWEEP TPMVAFSAHV FREEVEQYLT AGFAGFLPKP VTEKQLIETI GSILKGDKRV 840
  841 VVENIPFDNV STIELDIQDD NNGEKSEPDS VFPVLKESVL GDDLQVLGVE QVQKLIMLFA 900
  901 TSSSETLGKL QQAVEALDMA EVSNHAHTLK GAAGTMGLIR LHQECLLFEK AGKSGSLDGL 960
  961 DIKTVCQAFE ASKHALESTF IHSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle