YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90413116, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFELKKMISA LLMPLPAMLI LGFIGLLILW FTRRKGLASC FIAFAFLGIF MVAFQPIATS  60
   61 LLRPLETENQ PFVPSSTPVD YIMVLGSGHV IDKAMPITSE LSRTALMRLS EGMRIYRLFP 120
  121 GAKLILSGYG GGSDISQARM MAKVALALGV NKSDILLLET ARDTWEEAFQ AASVVGNKNL 180
  181 VLVTSASHMT RALYEFNQAG LTPTPAPTNF LASNKIKQPW DRYAPKAKYL EQTERYWHET 240
  241 MGQIWQRIRD KAANVEKDKA DEANKNADIS PVEILSEDDS NTTL

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.77
Transmembrane Helix	8	31	0.90
Cytoplasmic	32	36	0.73
Transmembrane Helix	37	59	0.88
Non-Cytoplasmic	60	284	0.79